課程資訊
課程名稱
後生遺傳調控機制新知
Frontiers in Epigenetic Regulatory Mechanisms 
開課學期
101-1 
授課對象
生物資源暨農學院  生物科技研究所  
授課教師
林劭品 
課號
Biot8012 
課程識別碼
642ED0140 
班次
 
學分
全/半年
半年 
必/選修
選修 
上課時間
星期一9,A(16:30~19:15) 
上課地點
生技所410 
備註
本課程以英語授課。
限博士班
總人數上限:20人
外系人數限制:15人 
Ceiba 課程網頁
http://ceiba.ntu.edu.tw/1011EpiMechanism 
課程簡介影片
 
核心能力關聯
核心能力與課程規劃關聯圖
課程大綱
為確保您我的權利,請尊重智慧財產權及不得非法影印
課程概述

Depends on the background of the students, around 1/3 of the lectures will be given by the instructor for introducing basic concepts in Epigenetic regulation of gene silencing, including DNA methylation, modification of chromatin packaging proteins and functional non-coding RNAs. These will cover the physiological process including Genomic Imprinting, Sex Chromosome Compensation, Silencing of Endogenous Retrotransposons and Newly Infected Viral Sequences, Stem Cell Biology. In addition, the involvement of Epigenetic Regulatory Mechanisms in Carcinogenesis, Animal Cloning, Reprogramming and Regenerative Medicine will be discussed. For the rest of the classes, students will be assigned the most updated original research papers and conference articles as well as the milestone publications. They will be randomly divided into 2 groups for each assignment. One group will be presenting the articles and students in the other group are expected to challenge the papers from the experimental design, the methodology to the interpretation of the data. Students in the 1st group should defend for the papers as if it’s their manuscript. Students from the 2nd group should also provide constructive advice as how to improve the manuscript so that it can be published in a higher impact journal. 

課程目標
On top of learning the basic concepts of Epigenetic Regulatory Mechanisms, keeping abreast of the most updated research internationally, students are expected to develop the ability to critically evaluate and interpret published research articles. In addition, they will learn the art of reviewing as well as defending a manuscript for publication. 
課程要求
Preferably having studied one of the following subjects: (Introductory) Epigenetics, Special Topics in Reprogramming, Genetics and Epigenetics in Germ and Stem Cells 
預期每週課後學習時數
 
Office Hours
 
指定閱讀
 
參考書目
Updated journal articles and reviews; “Epigenetics: Concepts, Theories, Paradigms and Mechanisms” and “Stem cell and Regenerative Medicine” CD-Roms (A Henry StewartTalks Series in the Life Sciences), National and International Conference Abstracts and Papers 
評量方式
(僅供參考)
   
課程進度
週次
日期
單元主題
Week 1
9/10  The appliction og NGS in Epigenetic studies
Cis-regulatory control of corticospinal system development and evolution.
 
Week 2
9/17  Efficient genetic midification and germ-line transmission of primordial germ cells usung piggyBac and Tol2 transposons.pdf 
Week 3
9/24  A genome-wide RNAi screen reveals determinants of human embryonic stem
cell identity.
 
Week 4
10/01  Differential genomic imprinting and expression of imprinted microRNAs in testes-derived male germ-line stem cells in mouse 
Week 5
10/08  Function, Targets, and Evolution of Caenorhabditis elegans piRNAs 
Week 6
10/15  Functions of PIWI proteins in spermatogenesis
 
Week 7
10/22  NEUROG3 Is a Critical Downstream Effector for STAT3-Regulated Differentiation of Mammalian Stem and Progenitor Spermatogonia  
Week 8
10/29  The Basement Membrane of Hair Follicle Stem Cells Is a Muscle Cell Niche 
Week 9
11/05  In Vivo Control of CpG and Non-CpG DNA Methylation by DNA Methyltransferases.
 
Week 10
11/12  Gender-Specific Hierarchy in Nuage Localization of PIWI-Interacting RNA Factors in Drosophila
 
Week 11
11/19  Heritable genome-wide variation of gene
expression and promoter methylation between
wild and domesticated chickens 
Week 12
11/26  Deep-Sequencing Reveals Specific microRNAs in An Autoregressive Tumor Model 
Week 13
12/03  Gene Expression and DNA Methylation Status of Chicken
Primordial Germ Cells 
Week 16
12/24  piRNAs Initiate an Epigenetic Memory of Nonself RNA in the C. elegans 
Week 17
12/31  The PIWI protein acts as a predictive marker for human gastric cancer